CDS

Accession Number TCMCG057C43475
gbkey CDS
Protein Id XP_018450819.1
Location complement(join(3583439..3583614,3583702..3583896,3583990..3584154,3584252..3584329,3584422..3584488,3584613..3584765,3584979..3585038,3585166..3585262,3585341..3585405,3585625..3585765,3585897..3585959,3586043..3586101,3586291..3586411,3586515..3586578,3586917..3586963,3587192..3587320,3587436..3587576,3587658..3587719,3587988..3588088,3588169..3588278,3588392..3588454,3588537..3588590))
Gene LOC108822278
GeneID 108822278
Organism Raphanus sativus

Protein

Length 736aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018595317.1
Definition PREDICTED: cleavage stimulation factor subunit 77 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Tetratricopeptide repeat
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14408        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042868        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGATAAGTACAACGTCGAGGAAGCAGAGGCTTTAGCAAAGAGAGCTTTGCACTTACCAATTGCACAGTCGACGCCAATCTATGAGCAGCTTTTGTCACTCTATCCAACTTCTGCGAGGTTTTGGAAGCAGTATGTGGAGACCCAAATGGCTGTGAACAATGATGATGCTACCAAACAGATTTTTAGTCGTTGTTTGTTGACCTGTCTTCAAGTTCCCCTTTGGCAATGTTACATTCGGTTCATCAGAAAGGTCTATGATAAGAAGGGAGCTGAGGGTCAAGAGGAGACCACAAAGGCTTTTGAGTTCACGCTTAATTATATTGGGACAGACATAGCATCTGGGCCTATATGGACTGAGTACATTACCTTTCTGAAATCTCTTCCGGCTCTTAACCCCCACGAAGATATGCAACGGAAGATTGCTCTCCGTAAAGTTTATCAGAGGGCTATACTAACTCCTACTCACCATGTTGAGCAACTTTGGAAAGAATATGAGAACTTTGAGAATTCTGTTAACCGTCAATTGGCCAAAGGACTCGTCAATGAATATCAACCAAAGTTTAACAGTGCCAGAGCTGTCTATAGGGAGCGCAAGAAGTACATTGAAGACATTGATTGGAACATGCTTGCTGTACCACCAACAGGATCTTCCAAGGAAGAAGTTCAATGGGTGGCCTGGAAGAAATTTTTGACCTTTGAGAAAGGAAACCCTCAAAGGATTGACACGGCCTTGTCAACTAAGCGGATTATATATGTTTATGAACAGTGTCTGATGTGTTTATACCACTATCCCGATGTCTGGTATGACTATGCTGAGTGGCACATAAAATCTGGTTCCACAGATGCTGCAATCAAAGTATTTCAGCGAGCTCTTAAAGCCATTCCTGATTCGGAAATGTTGAAATATGCTTATGCTGAGTTGGAGGAAGCTCGTGGAGCTATTCAGTCAGCAAAGAATTTATATGAAAGCATTTTGGGGGTTAGCACAAACTCCTTGGCACAAATACAATTCCTTCGTTTTCTCCGGAGGGCGGAGGGTGTTGAAGCTGCTCGCAAGTACTTTTTAGAAGTTAGAAAATCTCCTAGCTGTACATATCATGTGTATATTGCTTTTGCCACAATGGCCTTCTGTCTTGACAAGGATCCAAAGGCTGCTCATAACATCTTTGAGGAGGGATTGAAACGCTATATGACTGAACCCGTTTACATCCTTGAGTATGCAGATTTCTTGACTAGACTGAATGATGATAGAAATATCCGAGCTCTATTTGAACGAGCTTTAAGCACACTACCCACTGAAGAATCTGCTGAGGTCTGGAATAGATTCGTTCAGTTTGAGCAAACATATGGAGATCTTGCAAGTATTCTAAAGGTTGAGCAGAGAAGGAAAGAAGCACTTTTCGGAAAAGGAGAAGAGGGTTCTCCTGCTCTAGATAGTTCACTTCAAGATGTTGTTTCTCGGTACAGTTACATGGATCTTTGGCCGTGCTCTACGAATGAGCTTGATCATTTATCCAGACAAGAGTTGCTTGTGAAAAATATGAATAAGAAAGTAGAGAAGACAAACCTACCTCATGGAACTGCAACTATAGGTAGTGTAGCGTCTTCGTCAAAAGTTGTTTATCCAGATACAGCTCAGATGGTCGTCCATGACCCAACAAAGAAATCAGAGTTTTCTAGTTCTGCAAAACCAGTGGCAGCTGCTGCTTCGAACACCTTTCAAAGCAATGTGACAGCAACCGCAACTCATGGATCAGCCAGCACATTTGATGAAATACCAAAGAATACTCCACCTGCATTGTTAGCTTTTTTAGCTAACTTGCCTCATGTTGACGGCCCAACACCCAATGTAGATGTTGTTCTCTCAATATGTTTGCAGAGTGACTTACCAACAGGTCAAACTGCCAACAAGCAGAGTTTTACTGCTAAAGGCAATGTTCCAAGTCAAAATGATCACTCAGGTCCAAACCGAGGTGGAGCTCAGAGATTGCCAAGAGACAGAAGAGCTACAAAGAGAAAAGGTTCAGATAGAGGGCAAGAAGACGATGATACTACCTCCGTACAAAGCCAGCCTCTACCTACAGATGTGTTCAGACTAAGGCAAATGCGTAAGGCGAGAGGGATCTCAACATCATCACAGACCCCAACCGGTTCCGCTTCGTATGGTAGTGCCTACTCCGGTGAGCTATCTGGTAGCACCGGCTAA
Protein:  
MADKYNVEEAEALAKRALHLPIAQSTPIYEQLLSLYPTSARFWKQYVETQMAVNNDDATKQIFSRCLLTCLQVPLWQCYIRFIRKVYDKKGAEGQEETTKAFEFTLNYIGTDIASGPIWTEYITFLKSLPALNPHEDMQRKIALRKVYQRAILTPTHHVEQLWKEYENFENSVNRQLAKGLVNEYQPKFNSARAVYRERKKYIEDIDWNMLAVPPTGSSKEEVQWVAWKKFLTFEKGNPQRIDTALSTKRIIYVYEQCLMCLYHYPDVWYDYAEWHIKSGSTDAAIKVFQRALKAIPDSEMLKYAYAELEEARGAIQSAKNLYESILGVSTNSLAQIQFLRFLRRAEGVEAARKYFLEVRKSPSCTYHVYIAFATMAFCLDKDPKAAHNIFEEGLKRYMTEPVYILEYADFLTRLNDDRNIRALFERALSTLPTEESAEVWNRFVQFEQTYGDLASILKVEQRRKEALFGKGEEGSPALDSSLQDVVSRYSYMDLWPCSTNELDHLSRQELLVKNMNKKVEKTNLPHGTATIGSVASSSKVVYPDTAQMVVHDPTKKSEFSSSAKPVAAAASNTFQSNVTATATHGSASTFDEIPKNTPPALLAFLANLPHVDGPTPNVDVVLSICLQSDLPTGQTANKQSFTAKGNVPSQNDHSGPNRGGAQRLPRDRRATKRKGSDRGQEDDDTTSVQSQPLPTDVFRLRQMRKARGISTSSQTPTGSASYGSAYSGELSGSTG